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Shrinkage of factanal loadings

To: <s-news@lists.biostat.wustl.edu>
Subject: Shrinkage of factanal loadings
From: "Kurbat, Matt BGI SF" <Matt.Kurbat@barclaysglobal.com>
Date: Thu, 18 May 2006 20:26:08 -0700
Thread-index: AcZ68/CsX7A37+ctQWGWYsVpwYz9qg==
Thread-topic: Shrinkage of factanal loadings
Hello S+ Users,

I'm using factanal in S+ version 7.0 on Windows 
I find my out of sample fits have room for improvement, so I'd like to
improve them in a justifiable way.  

In more detail, my general setup looks like this: 

        factanal(InputData, NumFactors, method="mle")
        # InputData is typically 100 observations x 10 variables
        # NumFactors is estimated to be from 1-4 depending on the data
set

Selection of NumFactors is done using the standard chi-squared
distributed test statistic provided with factanal, and done until p>0.05
for adding another factor to the model (usually the number of factors is
very obvious - p very small before the last, but p>0.05 after the last).

If I test the resulting NumFactors using N-fold cross-validation (hold
out an observation, estimate model on the other N-1, then apply it to
the held out observation, then repeat for remaining observations), my
fit is not nearly as good out of sample.  For example, in one set of
cases where the test statistic says to fit 4 factors, I can perform
approximately as well out of sample using a simple 2 parameter model
where I estimate one average variance and one average correlation and
apply these estimates to every variable.

I can improve these out of sample fits using an heuristic form of
shrinkage akin to adjusted RSQ, but my justification for this is just
that, heuristic.  

My QUESTION is: can anyone refer me to a reference that performs some
sort of shrinkage on factanal loadings in a way that improves the out of
sample fit, or some other method that allows me to do this?  I would
have to guess that others using this technique would face similar
problems, but of course don't know this for sure.  

Thank you very much,  
Matt Kurbat 
 
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