Thanks to Ruud Koning who knew the answer for a two-level factor.
Does anyone, by any chance, know the default contrasts for a 4-level factor?
The default contrasts for the factor itself result in k-1 (i.e. 3) coefficients
contrasts(datafin$soil)
[,1] [,2] [,3]
K -1 -1 -1
L 1 -1 -1
V 0 2 -1
Z 0 0 3
The interaction term results in 4 coefficients
f1 <- glm(Caltpalu ~ soil:mean, data = datafin, family = binomial)
coef(f1)
(Intercept) soilKmean soilLmean soilVmean soilZmean
-0.8134896782 16.36298448 2.315063712 -0.7620437211 10.34777897
Which contrasts did S+ use here?
Thanks in advance,
Ana
|