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Re: plsmo

To: "Liaw, Andy" <andy_liaw@merck.com>
Subject: Re: plsmo
From: Frank E Harrell Jr <feh3k@spamcop.net>
Date: Fri, 26 Mar 2004 16:52:54 -0500
Cc: osman.al.radi@utoronto.ca, s-news@lists.biostat.wustl.edu
In-reply-to: <3A822319EB35174CA3714066D590DCD504AF7AA7@usrymx25.merck.com>
Organization: Vanderbilt University
References: <3A822319EB35174CA3714066D590DCD504AF7AA7@usrymx25.merck.com>
On Fri, 26 Mar 2004 16:41:04 -0500
"Liaw, Andy" <andy_liaw@merck.com> wrote:

> Frank,
> 
> Note this is R 1.8 (which doesn't really exist).  Probably want save()
> instead, perhaps with ascii=TRUE, instead of data.dump()...
> 
> Osman:  Please post R questions on R-help rather than S-news.
> 
> Cheers,
> Andy

Right, I was assuming this was S-Plus because of the posting to s-news. 
save(...., compress=T) is a great way to share data in R.  I wish S-Plus
had it.  -Frank

> 
> > From: Frank E Harrell Jr
> > Sent: Friday, March 26, 2004 3:41 PM
> > To: Osman
> > Cc: s-news@lists.biostat.wustl.edu
> > Subject: Re: [S] plsmo
> > 
> > 
> > On Fri, 26 Mar 2004 15:32:37 -0500
> > "Osman" <osman.al.radi@utoronto.ca> wrote:
> > 
> > > Dear all,
> > > 
> > > I use R 1.8 and the latest Hmisc and Design. 
> > > 
> > > When I use plsmo() to plot data :
> > > 
> > > > 
> > plsmo(bScore,HospDeath,group=SURG,datadensity=T,subset=SURG!='O',col=
> > > > 40:59,ltw=2)
> > > 
> > > I get a graph where the data density jitter is not plotted 
> > for some of
> > > the groups (curves) and I get the follwoing warning..
> > > 23: Collapsing to unique x values in: approx(xx[s], yy[s], xout =
> > > c(xt[i] - w/2, xt[i] + w/2), rule = 2) 
> > 
> > Ignore that warning
> > 
> > > ..
> > > 
> > > Can someone help me get rid of this problem..
> > 
> > If you can send a minimal example that fails I will fix the 
> > problem.  It's
> > best to simulate data and send the code that did that.  
> > Second best is to
> > subset your data as small as you can and data.dump( ...., 
> > oldStyle=T) and
> > e-mail it to me (possibly compressed).  -Frank
> > 
> > > 
> > > Thanks
> > > 
> > > Osman
> > > 
> > 
> > 
> > ---
> > Frank E Harrell Jr   Professor and Chair           School of Medicine
> >                      Department of Biostatistics   Vanderbilt 
> > University
> > --------------------------------------------------------------------
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> > 
> 
> 
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---
Frank E Harrell Jr   Professor and Chair           School of Medicine
                     Department of Biostatistics   Vanderbilt University

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