It's in siggenes, in BioConductor. I'm not sure if that package made
it into Insightful's ArrayAnalyzer, due to the a combination of patent
issues and copyright (BioC says "buyer beware" i.e. that the user
needs to ensure that they respect both patent and copyright, but
Insightful doesn't quite have that luxury when selling the value-added
version.
On Tue, 25 Jan 2005 22:06:02 -0000, mica <statman1957@hotmail.com> wrote:
>
> See, e.g. https://stat.ethz.ch/pipermail/
> bioconductor/2003-June/001586.html
>
> this implies that there were some legal problems regarding the version
> posted, if not the algorithm itself per se. The links to download gene-sig
> posted there are all broken, indicating that it has been withdrawn from
> circulation.
>
> Regards,
>
> Mike
>
> ________________________________
> From: Xao Ping [mailto:xao_ping@yahoo.com]
> Sent: 25 January 2005 20:56
> To: mica
> Subject: Re: [S] SAM algorithm
>
>
>
> Thanks, Mike
> Is it possible to obtain it? I do not see any patent problems. The algorith
> is published and widely known. In fact, I am programming it myself now, but
> I have some problems in understanding minor details.
> Xao
>
>
> mica <statman1957@hotmail.com> wrote:
>
>
> I think that you will find that there *was* a version of the SAM algorithm
> implemented for S-Plus by Holger Schwender. However, he had to withdraw this
> due to the patents that apply to the algorithm.
>
> Regards
>
> Mike
>
> ________________________________
> From: s-news-owner@lists.biostat.wustl.edu
> [mailto:s-news-owner@lists.biostat.wustl.edu] On Behalf Of Xao Ping
> Sent: 25 January 2005 16:35
> To: s-plus user list
> Subject: [S] SAM algorithm
>
>
>
> Dear All:
> I am wondering if there is an S-PLUS implementation of the SAM algorithm by
> Tibshirani et al?
> Thanks
>
> Xao Ping
> R&R Pharmakinetics
> Taiwan
>
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--
best,
-tony
"Commit early,commit often, and commit in a repository from which we can easily
roll-back your mistakes" (AJR, 4Jan05).
A.J. Rossini
blindglobe@gmail.com
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