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Re: competing risk model with time dependent covariates

To: phguardiol@aol.com
Subject: Re: competing risk model with time dependent covariates
From: Frank E Harrell Jr <f.harrell@vanderbilt.edu>
Date: Sat, 26 Jul 2008 09:35:29 -0500
Cc: s-news@lists.biostat.wustl.edu
In-reply-to: <8CABD404B095146-1AC8-CE2@mblk-d11.sysops.aol.com>
References: <8CABD404B095146-1AC8-CE2@mblk-d11.sysops.aol.com>
User-agent: Thunderbird 2.0.0.16 (X11/20080724)
phguardiol@aol.com wrote:

Dear S users,

is there a way, I mean a package, to perform a competing risk model which can handle time dependent covariates ?

my main covariate (additional treatment to patients) appears not to follow the proportional hazards assumption, its effect being observed after one year of treatment but not before (this is expected / makes sense on a clinical point of view). SO I was planning to use a time dependent Cox model with 2 time intervals for patients < > 1 year etc...

Philippe,

As your main covariate is an internal time-dependent covariate, it will be impossible to interpret its effect without having in the model (to condition on) the variables that indicate the reason for the treatment. These variables need to be measured before the auxiliary treatment. This is to get around "treatment by indication" bias.

I don't know the answer to your question, though. I hope there is some S-Plus or R software for time-dependent covariates with competing risks as we may have need for that also.

Frank


However, a large number of patients dies from treatment related complications of unrelated to the disease and the treatment (elderly patients) so to analyze the effect of my covariate of interest on disease free survival and relapse incidence, I d like to use a competing risk model such as the Gray CMPRSK.

My problem is that I cannot have multiple "lines" for the same patient with this package (for time dep covariates 2 or 3 lines with same Id /UPN).
How can I manage this !!!???
Any help will be greatly appreciated
Thanks
Yours sincerely

Philippe Guardiola




--
Frank E Harrell Jr   Professor and Chair           School of Medicine
                     Department of Biostatistics   Vanderbilt University

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