| To: | <s-news@lists.biostat.wustl.edu> |
|---|---|
| Subject: | Writing a function taking a data.frame column name as a parameter |
| From: | "Hunsicker, Lawrence" <lawrence-hunsicker@uiowa.edu> |
| Date: | Fri, 26 Dec 2008 14:57:45 -0600 |
| Thread-index: | AclnnJnYPZuBT/I7RXe3wPLTXNh0dQ== |
| Thread-topic: | [S] Writing a function taking a data.frame column name as a parameter |
|
Hi again, folks, and happy Boxing Day to all: I have written a script that works:
temp <- working7[!is.na(working7$Sexe),] any.glmm<-glmmPQL(fixed = anyCVD ~ Sexe , random = ~1|Region/Pays/Center, family = binomial(link=logit), data = temp) list("Sexe", anova(any.glmm), any.glmm$coefficients$fixed)
I now want to automate this script to run with a number of columns in a data frame with over 100 columns. It would be nice to set this up as a function that I could apply with sapply. I have tried to define the function as follows:
testfx <- function(x) { temp <- working7[!is.na(working7$x),] any.glmm<-glmmPQL(fixed = anyCVD ~ x , random = ~1|Region/Pays/Center, family = binomial(link=logit), data = ""> list(x, anova(any.glmm), any.glmm$coefficients$fixed)
This compiles. But when I try to run the functio entering a column name in the place of x 9e.g., testfx(“Sexe”), it always abends with the message: Ethnie.glmm <- testfx("Ethnie") Problem in testfx("Ethnie"): Length of anyCVD (variable 1) is 0 != length of others (10) Same if I enter the column name unquoted, or use an index.
What am I doing wrong? How does one enter a column name (or column number) as a parameter in a self-defined function?
As always, many thanks to anyone that can help me here. Larry Hunsicker
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